| STRuster results: 89788 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a/b) |
| Fold: | Periplasmic binding protein-like II |
| Superfamily: | Periplasmic binding protein-like II |
| Family: | Phosphate binding protein-like |
| Protein: | N-methyl-D-aspartate receptor subunit 1 |
| Species: | Rat (Rattus norvegicus) |
| Species SCOP sunid: | 89788 |
| Set description |
| Number of entries: | 4 |
| SCOP Entries: | d1pbqa_ d1pb9a_ d1pb7a_ d1pb8a_ |
| Alignment File: | 89788.alig |
| Aligned Sequences: | 89788_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 89788_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(29, 30), (294, 299), (339, 358), (397, 404)] |
| Uniprot Nr | [(425, 426), (690, 695), (735, 754), (793, 800)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 28), (359, 396)] |
| Uniprot Nr | [(396, 424), (755, 792)] |
| Superposition | 89788_superp_1.pdb.gz |
| Rasmol Script | 89788_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(300, 338)] |
| Uniprot Nr | [(696, 734)] |
| Superposition | 89788_superp_2.pdb.gz |
| Rasmol Script | 89788_superp_2.rsm |
| View in Jmol | |
