STRuster results: 88997 |
SCOP 1.71 classification |
Class: | All alpha proteins |
Fold: | RuvA C-terminal domain-like |
Superfamily: | UBA-like |
Family: | CUE domain |
Protein: | Vacuolar protein sorting-associated protein vps9 |
Species: | Baker's yeast (Saccharomyces cerevisiae) |
Species SCOP sunid: | 88997 |
Set description |
Number of entries: | 3 |
SCOP Entries: | d1p3qq_ d1mn3a_ d1p3qr_ |
Alignment File: | 88997.alig |
Aligned Sequences: | 88997_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 88997_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(19, 20), (32, 55)] |
Uniprot Nr | [(417, 418), (428, 451)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(0, 18), (21, 31)] |
Uniprot Nr | [(398, 416), (418, 427)] |
Superposition | 88997_superp_1.pdb.gz |
Rasmol Script | 88997_superp_1.rsm |
View in Jmol | |