| STRuster results: 88808 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a+b) |
| Fold: | MHC antigen-recognition domain |
| Superfamily: | MHC antigen-recognition domain |
| Family: | MHC antigen-recognition domain |
| Protein: | Class II MHC alpha chain, N-terminal domain |
| Species: | Human (Homo sapiens), HLA-DR1 |
| Species SCOP sunid: | 88808 |
| Set description |
| Number of entries: | 20 |
| SCOP Entries: | d1sjea2 d1lo5a2 d1t5xa2 d1t5wd2 d1hxya2 d1h15a2 d2seba2 d1klua2 d1h15d2 d1aqdg2 d1aqda2 d1kg0a2 d1fyta2 d1aqdd2 d1sebe2 d1t5wa2 d1klga2 d1sjha2 d1aqdj2 d1seba2 |
| Alignment File: | 88808.alig |
| Aligned Sequences: | 88808_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 88808_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 1)] |
| Uniprot Nr | [(26, 27)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(2, 80)] |
| Uniprot Nr | [(28, 106)] |
| Superposition | 88808_superp_1.pdb.gz |
| Rasmol Script | 88808_superp_1.rsm |
| View in Jmol | |
