STRuster results: 88712 |
SCOP 1.71 classification |
Class: | Alpha and beta proteins (a/b) |
Fold: | TIM beta/alpha-barrel |
Superfamily: | Cobalamin (vitamin B12)-dependent enzymes |
Family: | Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |
Protein: | Methylmalonyl-CoA mutase beta subunit, domain 1 |
Species: | Propionibacterium freudenreichii, subsp. shermanii |
Species SCOP sunid: | 88712 |
Set description |
Number of entries: | 15 |
SCOP Entries: | d4reqb1 d1e1cb1 d2reqb1 d3reqb1 d6reqb1 d1reqb1 d5reqb1 d4reqd1 d1reqd1 d7reqd1 d5reqd1 d6reqd1 d7reqb1 d1e1cd1 d2reqd1 |
Alignment File: | 88712.alig |
Aligned Sequences: | 88712_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 88712_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(0, 2)] |
Uniprot Nr | [(15, 17)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(3, 459)] |
Uniprot Nr | [(18, 474)] |
Superposition | 88712_superp_1.pdb.gz |
Rasmol Script | 88712_superp_1.rsm |
View in Jmol | |