| STRuster results: 88669 |
| SCOP 1.71 classification |
| Class: | All alpha proteins |
| Fold: | DNA/RNA-binding 3-helical bundle |
| Superfamily: | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| Family: | Sigma4 domain |
| Protein: | Sigma70 (SigA, RpoD) |
| Species: | Thermus aquaticus |
| Species SCOP sunid: | 88669 |
| Set description |
| Number of entries: | 4 |
| SCOP Entries: | d1ku3a_ d1ku7d_ d1ku7a_ d1rioh_ |
| Alignment File: | 88669.alig |
| Aligned Sequences: | 88669_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 88669_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 9), (59, 72)] |
| Uniprot Nr | [(366, 375), (425, 438)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(10, 58)] |
| Uniprot Nr | [(376, 424)] |
| Superposition | 88669_superp_1.pdb.gz |
| Rasmol Script | 88669_superp_1.rsm |
| View in Jmol | |
