STRuster

 STRuster results: 88521

 SCOP 1.71 classification
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Family: V set domains (antibody variable domain-like)
Protein: Immunoglobulin light chain kappa variable domain, VL-kappa
Species: Human (Homo sapiens), cluster 2
Species SCOP sunid: 88521

 Set description
Number of entries: 14
SCOP Entries: d1ek3a_ d2lve__ d5lvea_ d3lve__ d1eeqb_ d1eeub_ d1qaca_ d4lveb_ d1qacb_ d1eeqa_ d4lvea_ d1ek3b_ d1eeua_ d1lve__
Alignment File: 88521.alig
Aligned Sequences: 88521_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88521_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(112, 113)]
Uniprot Nr [(113, 114)]

 Invariant Regions
Region1
Alignment Nr[(0, 111)]
Uniprot Nr[(1, 112)]
Superposition88521_superp_1.pdb.gz
Rasmol Script88521_superp_1.rsm
View in Jmol