STRuster

STRuster results: 82859

SCOP 1.71 classification

Class:	Multi-domain proteins (alpha and beta)
Fold:	L-A virus major coat protein
Superfamily:	L-A virus major coat protein
Family:	L-A virus major coat protein
Protein:	L-A virus major coat protein
Species:	Saccharomyces cerevisiae virus L-A
Species SCOP sunid:	82859

Set description

Number of entries:	2
SCOP Entries:	d1m1ca_ d1m1cb_
Alignment File:	82859.alig
Aligned Sequences:	82859_alig.fasta

Hierarchical clustering

Dissimilary matrix:

82859_dissim_matrix.txt

Atom Distance Standard Deviation Plots

S matrix: Distance Standard Deviation

Higher resolution plot

S matrix

T matirx: Total Standard Deviation

Higher resolution plot

T matrix

R matrix: Relative Distance Standard Deviation

Higher resolution plot

R matrix

Hinges and Invariant Regions (T)

Hinges

Alignment Nr	[(0, 13), (37, 39), (76, 113), (156, 157), (191, 193), (254, 256), (304, 305), (383, 396), (413, 414), (432, 501), (520, 577), (592, 613), (641, 650)]
Uniprot Nr	[(1, 14), (38, 40), (77, 114), (157, 158), (192, 194), (255, 257), (305, 306), (384, 397), (414, 415), (433, 502), (521, 578), (593, 614), (642, 651)]

Invariant Regions

Region	1
Alignment Nr	[(14, 36), (40, 75), (114, 155), (158, 190), (194, 253), (257, 303), (306, 382), (397, 412), (415, 431), (614, 640)]
Uniprot Nr	[(15, 37), (41, 76), (115, 156), (159, 191), (195, 254), (258, 304), (307, 383), (398, 413), (416, 432), (615, 641)]
Superposition	82859_superp_1.pdb.gz
Rasmol Script	82859_superp_1.rsm
View in Jmol
Region	2
Alignment Nr	[(14, 36), (40, 75), (158, 190), (194, 253), (257, 303), (306, 382), (397, 412), (415, 431), (502, 519), (578, 591)]
Uniprot Nr	[(15, 37), (41, 76), (159, 191), (195, 254), (258, 304), (307, 383), (398, 413), (416, 432), (503, 520), (579, 592)]
Superposition	82859_superp_2.pdb.gz
Rasmol Script	82859_superp_2.rsm
View in Jmol
Region	3
Alignment Nr	[(14, 36), (40, 75), (158, 190), (194, 253), (257, 303), (306, 382), (397, 412), (415, 431), (502, 519), (614, 640)]
Uniprot Nr	[(15, 37), (41, 76), (159, 191), (195, 254), (258, 304), (307, 383), (398, 413), (416, 432), (503, 520), (615, 641)]
Superposition	82859_superp_3.pdb.gz
Rasmol Script	82859_superp_3.rsm
View in Jmol