| STRuster results: 82015 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Nucleoplasmin-like/VP (viral coat and capsid proteins) |
| Superfamily: | Group II dsDNA viruses VP |
| Family: | Major capsid protein vp54 |
| Protein: | Major capsid protein vp54 |
| Species: | Paramecium bursaria chorella virus type 1, PBCV-1 |
| Species SCOP sunid: | 82015 |
| Set description |
| Number of entries: | 12 |
| SCOP Entries: | d1j5qb2 d1j5qb1 d1m3yd1 d1m3yd2 d1j5qa2 d1m3ya2 d1m3ya1 d1m3yb2 d1m3yb1 d1m3yc2 d1j5qa1 d1m3yc1 |
| Alignment File: | 82015.alig |
| Aligned Sequences: | 82015_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 82015_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(214, 215)] |
| Uniprot Nr | [(238, 239)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 213), (216, 412)] |
| Uniprot Nr | [(24, 237), (240, 436)] |
| Superposition | - |
