STRuster results: 75494 |
SCOP 1.71 classification |
Class: | Alpha and beta proteins (a+b) |
Fold: | Origin of replication-binding domain, RBD-like |
Superfamily: | Origin of replication-binding domain, RBD-like |
Family: | Replication protein Rep, nuclease domain |
Protein: | Replication protein Rep, nuclease domain |
Species: | Adeno-associated virus, aav-5 |
Species SCOP sunid: | 75494 |
Set description |
Number of entries: | 9 |
SCOP Entries: | d1rz9a_ d1rz9b_ d1m55b_ d1rz9d_ d1uuta_ d1rz9e_ d1m55a_ d1uutb_ d1rz9c_ |
Alignment File: | 75494.alig |
Aligned Sequences: | 75494_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 75494_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(0, 31), (82, 86), (137, 139), (187, 194)] |
Uniprot Nr | [(1, 32), (83, 87), (138, 140), (188, 195)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(32, 81), (87, 136), (140, 186)] |
Uniprot Nr | [(33, 82), (88, 137), (141, 187)] |
Superposition | 75494_superp_1.pdb.gz |
Rasmol Script | 75494_superp_1.rsm |
View in Jmol | |