| STRuster results: 74867 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Common fold of diphtheria toxin/transcription factors/cytochrome f |
| Superfamily: | p53-like transcription factors |
| Family: | Rel/Dorsal transcription factors, DNA-binding domain |
| Protein: | p65 subunit of NF-kappa B (NFKB), N-terminal domain |
| Species: | Chicken (Gallus gallus), C-rel |
| Species SCOP sunid: | 74867 |
| Set description |
| Number of entries: | 2 |
| SCOP Entries: | d1gjib2 d1gjia2 |
| Alignment File: | 74867.alig |
| Aligned Sequences: | 74867_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 74867_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(20, 21), (34, 36), (47, 63), (85, 90), (111, 135), (150, 154), (170, 174)] |
| Uniprot Nr | [(27, 28), (41, 43), (54, 70), (92, 97), (118, 142), (157, 161), (177, 181)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 19), (22, 33), (37, 46), (64, 84), (91, 110), (136, 149), (155, 169)] |
| Uniprot Nr | [(7, 26), (29, 40), (44, 53), (71, 91), (98, 117), (143, 156), (162, 176)] |
| Superposition | 74867_superp_1.pdb.gz |
| Rasmol Script | 74867_superp_1.rsm |
| View in Jmol | |
