STRuster results: 69891 |
SCOP 1.71 classification |
Class: | Multi-domain proteins (alpha and beta) |
Fold: | Prokaryotic type I DNA topoisomerase |
Superfamily: | Prokaryotic type I DNA topoisomerase |
Family: | Prokaryotic type I DNA topoisomerase |
Protein: | Topoisomerase "domain" of reverse gyrase |
Species: | Archaeon Archaeoglobus fulgidus |
Species SCOP sunid: | 69891 |
Set description |
Number of entries: | 3 |
SCOP Entries: | d1gkub3 d1gl9c3 d1gl9b3 |
Alignment File: | 69891.alig |
Aligned Sequences: | 69891_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 69891_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(62, 83), (107, 109), (148, 149), (194, 218), (230, 231), (249, 249), (267, 270), (331, 344), (397, 433), (448, 453), (492, 555)] |
Uniprot Nr | [(561, 582), (606, 608), (647, 648), (693, 717), (729, 730), (748, 748), (766, 769), (830, 843), (896, 932), (947, 952), (991, 1054)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(0, 61), (110, 147), (150, 193), (219, 229), (271, 330), (345, 396), (454, 491)] |
Uniprot Nr | [(499, 560), (609, 646), (649, 692), (718, 728), (770, 829), (844, 895), (953, 990)] |
Superposition | 69891_superp_1.pdb.gz |
Rasmol Script | 69891_superp_1.rsm |
View in Jmol | |