| STRuster results: 69882 |
| SCOP 1.71 classification |
| Class: | Multi-domain proteins (alpha and beta) |
| Fold: | DNA/RNA polymerases |
| Superfamily: | DNA/RNA polymerases |
| Family: | RNA-dependent RNA-polymerase |
| Protein: | Viral RNA polymerase |
| Species: | Rabbit hemorrhagic disease virus |
| Species SCOP sunid: | 69882 |
| Set description |
| Number of entries: | 4 |
| SCOP Entries: | d1khva_ d1khwb_ d1khwa_ d1khvb_ |
| Alignment File: | 69882.alig |
| Aligned Sequences: | 69882_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 69882_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 26), (46, 56), (118, 120), (133, 136), (174, 183), (244, 245), (380, 385), (495, 496)] |
| Uniprot Nr | [(1256, 1282), (1302, 1312), (1374, 1376), (1389, 1392), (1430, 1439), (1500, 1501), (1636, 1641), (1751, 1752)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(27, 45), (57, 117), (121, 132), (137, 173), (184, 243), (386, 494)] |
| Uniprot Nr | [(1283, 1301), (1313, 1373), (1377, 1388), (1393, 1429), (1440, 1499), (1642, 1750)] |
| Superposition | 69882_superp_1.pdb.gz |
| Rasmol Script | 69882_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(57, 117), (121, 132), (137, 173), (184, 243), (246, 379), (386, 494)] |
| Uniprot Nr | [(1313, 1373), (1377, 1388), (1393, 1429), (1440, 1499), (1502, 1635), (1642, 1750)] |
| Superposition | 69882_superp_2.pdb.gz |
| Rasmol Script | 69882_superp_2.rsm |
| View in Jmol | |
