STRuster

STRuster results: 69435

SCOP 1.71 classification

Class:	Alpha and beta proteins (a/b)
Fold:	Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:	L domain-like
Family:	Leucine rich effector protein YopM
Protein:	Leucine rich effector protein YopM
Species:	Yersinia pestis
Species SCOP sunid:	69435

Set description

Number of entries:	2
SCOP Entries:	d1jl5a_ d1g9ua_
Alignment File:	69435.alig
Aligned Sequences:	69435_alig.fasta

Hierarchical clustering

Dissimilary matrix:

69435_dissim_matrix.txt

Atom Distance Standard Deviation Plots

S matrix: Distance Standard Deviation

Higher resolution plot

S matrix

T matirx: Total Standard Deviation

Higher resolution plot

T matrix

R matrix: Relative Distance Standard Deviation

Higher resolution plot

R matrix

Hinges and Invariant Regions (T)

Hinges

Alignment Nr	[(57, 59), (93, 95), (107, 164), (183, 183), (258, 263), (278, 281), (310, 311), (335, 352)]
Uniprot Nr	[(91, 93), (127, 129), (141, 198), (217, 217), (292, 297), (312, 315), (344, 345), (369, 386)]

Invariant Regions

Region	1
Alignment Nr	[(165, 182), (184, 257), (264, 277), (282, 309)]
Uniprot Nr	[(199, 216), (218, 291), (298, 311), (316, 343)]
Superposition	69435_superp_1.pdb.gz
Rasmol Script	69435_superp_1.rsm
View in Jmol
Region	2
Alignment Nr	[(0, 56), (60, 92), (96, 106)]
Uniprot Nr	[(34, 90), (94, 126), (130, 140)]
Superposition	69435_superp_2.pdb.gz
Rasmol Script	69435_superp_2.rsm
View in Jmol
Region	3
Alignment Nr	[(264, 277), (282, 309), (312, 334)]
Uniprot Nr	[(298, 311), (316, 343), (346, 368)]
Superposition	69435_superp_3.pdb.gz
Rasmol Script	69435_superp_3.rsm
View in Jmol
Region	4
Alignment Nr	[(96, 106), (165, 182)]
Uniprot Nr	[(130, 140), (199, 216)]
Superposition	-