| STRuster results: 64141 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a/b) |
| Fold: | Nucleotide-diphospho-sugar transferases |
| Superfamily: | Nucleotide-diphospho-sugar transferases |
| Family: | Cytidylytransferase |
| Protein: | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) |
| Species: | Escherichia coli |
| Species SCOP sunid: | 64141 |
| Set description |
| Number of entries: | 9 |
| SCOP Entries: | d1vgub_ d1h3mb_ d1h3ma_ d1inja_ d1inia_ d1i52a_ d1vgua_ d1vgtb_ d1vgta_ |
| Alignment File: | 64141.alig |
| Aligned Sequences: | 64141_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 64141_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 31), (56, 57), (76, 79), (142, 144), (224, 225)] |
| Uniprot Nr | [(3, 34), (59, 60), (79, 82), (145, 147), (227, 228)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(32, 55), (58, 75), (80, 141), (145, 223)] |
| Uniprot Nr | [(35, 58), (61, 78), (83, 144), (148, 226)] |
| Superposition | 64141_superp_1.pdb.gz |
| Rasmol Script | 64141_superp_1.rsm |
| View in Jmol | |
