STRuster results: 63922 |
SCOP 1.71 classification |
Class: | Alpha and beta proteins (a/b) |
Fold: | TIM beta/alpha-barrel |
Superfamily: | Aldolase |
Family: | Class I DAHP synthetase |
Protein: | 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |
Species: | Aquifex aeolicus |
Species SCOP sunid: | 63922 |
Set description |
Number of entries: | 32 |
SCOP Entries: | d1jcya_ d1fwna_ d1lrob_ d1fwnb_ d1jcxb_ d1lrqb_ d1pe1b_ d1pcwb_ d1lrnb_ d1fwwb_ d1fwta_ d1jcyb_ d1lrna_ d1fxpa_ d1fwwa_ d1fxqb_ d1fy6b_ d1pcka_ d1jcxa_ d1fwsb_ d1lroa_ d1fx6b_ d1fwsa_ d1fx6a_ d1fxpb_ d1pe1a_ d1fy6a_ d1fxqa_ d1pckb_ d1lrqa_ d1pcwa_ d1fwtb_ |
Alignment File: | 63922.alig |
Aligned Sequences: | 63922_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 63922_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(0, 0), (188, 193)] |
Uniprot Nr | [(1, 1), (189, 194)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(1, 187), (194, 263)] |
Uniprot Nr | [(2, 188), (195, 264)] |
Superposition | 63922_superp_1.pdb.gz |
Rasmol Script | 63922_superp_1.rsm |
View in Jmol | |