| STRuster results: 57524 |
| SCOP 1.71 classification |
| Class: | Small proteins |
| Fold: | Cystine-knot cytokines |
| Superfamily: | Cystine-knot cytokines |
| Family: | Neurotrophin |
| Protein: | Neurotrophin 4, NT4 |
| Species: | Human (Homo sapiens) |
| Species SCOP sunid: | 57524 |
| Set description |
| Number of entries: | 4 |
| SCOP Entries: | d1hcfa_ d1b8mb_ d1b98m_ d1hcfb_ |
| Alignment File: | 57524.alig |
| Aligned Sequences: | 57524_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 57524_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 12), (42, 49), (61, 75), (102, 105), (121, 129)] |
| Uniprot Nr | [(81, 93), (123, 130), (142, 156), (183, 186), (202, 210)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(13, 41), (50, 60), (106, 120)] |
| Uniprot Nr | [(94, 122), (131, 141), (187, 201)] |
| Superposition | 57524_superp_1.pdb.gz |
| Rasmol Script | 57524_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(50, 60), (76, 101), (106, 120)] |
| Uniprot Nr | [(131, 141), (157, 182), (187, 201)] |
| Superposition | 57524_superp_2.pdb.gz |
| Rasmol Script | 57524_superp_2.rsm |
| View in Jmol | |
