STRuster

STRuster results: 56834

SCOP 1.71 classification

Class:	Multi-domain proteins (alpha and beta)
Fold:	Reovirus inner layer core protein p3
Superfamily:	Reovirus inner layer core protein p3
Family:	Orbivirus core
Protein:	BTV vp3
Species:	Bluetongue virus, strain 1
Species SCOP sunid:	56834

Set description

Number of entries:	2
SCOP Entries:	d2btva_ d2btvb_
Alignment File:	56834.alig
Aligned Sequences:	56834_alig.fasta

Hierarchical clustering

Dissimilary matrix:

56834_dissim_matrix.txt

Atom Distance Standard Deviation Plots

S matrix: Distance Standard Deviation

Higher resolution plot

S matrix

T matirx: Total Standard Deviation

Higher resolution plot

T matrix

R matrix: Relative Distance Standard Deviation

Higher resolution plot

R matrix

Hinges and Invariant Regions (T)

Hinges

Alignment Nr	[(53, 59), (89, 91), (113, 114), (135, 137), (184, 193), (216, 224), (239, 259), (275, 276), (299, 328), (348, 360), (379, 381), (422, 424), (452, 461), (472, 487), (500, 502), (529, 538), (551, 558), (647, 662), (731, 736), (765, 769), (791, 791), (807, 812), (829, 830), (867, 894)]
Uniprot Nr	[(60, 66), (96, 98), (120, 121), (142, 144), (191, 200), (223, 231), (246, 266), (282, 283), (306, 335), (355, 367), (386, 388), (429, 431), (459, 468), (479, 494), (507, 509), (536, 545), (558, 565), (654, 669), (738, 743), (772, 776), (798, 798), (814, 819), (836, 837), (874, 901)]

Invariant Regions

Region	1
Alignment Nr	[(0, 52), (225, 238), (260, 274), (277, 298), (329, 347), (361, 378), (382, 421), (425, 451), (462, 471), (488, 499), (503, 528), (539, 550)]
Uniprot Nr	[(7, 59), (232, 245), (267, 281), (284, 305), (336, 354), (368, 385), (389, 428), (432, 458), (469, 478), (495, 506), (510, 535), (546, 557)]
Superposition	56834_superp_1.pdb.gz
Rasmol Script	56834_superp_1.rsm
View in Jmol
Region	2
Alignment Nr	[(0, 52), (60, 88), (260, 274), (277, 298), (329, 347), (361, 378), (382, 421), (425, 451), (488, 499), (503, 528), (539, 550)]
Uniprot Nr	[(7, 59), (67, 95), (267, 281), (284, 305), (336, 354), (368, 385), (389, 428), (432, 458), (495, 506), (510, 535), (546, 557)]
Superposition	56834_superp_2.pdb.gz
Rasmol Script	56834_superp_2.rsm
View in Jmol
Region	3
Alignment Nr	[(0, 52), (60, 88), (92, 112), (115, 134), (138, 183), (194, 215), (559, 646), (663, 730), (831, 866)]
Uniprot Nr	[(7, 59), (67, 95), (99, 119), (122, 141), (145, 190), (201, 222), (566, 653), (670, 737), (838, 873)]
Superposition	56834_superp_3.pdb.gz
Rasmol Script	56834_superp_3.rsm
View in Jmol
Region	4
Alignment Nr	[(0, 52), (60, 88), (92, 112), (115, 134), (138, 183), (194, 215), (663, 730), (770, 790), (831, 866)]
Uniprot Nr	[(7, 59), (67, 95), (99, 119), (122, 141), (145, 190), (201, 222), (670, 737), (777, 797), (838, 873)]
Superposition	-
Region	5
Alignment Nr	[(0, 52), (60, 88), (92, 112), (115, 134), (138, 183), (277, 298), (559, 646), (663, 730), (831, 866)]
Uniprot Nr	[(7, 59), (67, 95), (99, 119), (122, 141), (145, 190), (284, 305), (566, 653), (670, 737), (838, 873)]
Superposition	-
Region	6
Alignment Nr	[(0, 52), (92, 112), (115, 134), (138, 183), (194, 215), (663, 730), (770, 790), (813, 828), (831, 866)]
Uniprot Nr	[(7, 59), (99, 119), (122, 141), (145, 190), (201, 222), (670, 737), (777, 797), (820, 835), (838, 873)]
Superposition	-
Region	7
Alignment Nr	[(0, 52), (60, 88), (92, 112), (115, 134), (260, 274), (277, 298), (559, 646), (663, 730)]
Uniprot Nr	[(7, 59), (67, 95), (99, 119), (122, 141), (267, 281), (284, 305), (566, 653), (670, 737)]
Superposition	-
Region	8
Alignment Nr	[(0, 52), (92, 112), (115, 134), (138, 183), (277, 298), (663, 730), (813, 828), (831, 866)]
Uniprot Nr	[(7, 59), (99, 119), (122, 141), (145, 190), (284, 305), (670, 737), (820, 835), (838, 873)]
Superposition	-
Region	9
Alignment Nr	[(0, 52), (60, 88), (92, 112), (260, 274), (277, 298), (503, 528), (663, 730)]
Uniprot Nr	[(7, 59), (67, 95), (99, 119), (267, 281), (284, 305), (510, 535), (670, 737)]
Superposition	-
Region	10
Alignment Nr	[(0, 52), (92, 112), (260, 274), (277, 298), (462, 471), (503, 528), (663, 730)]
Uniprot Nr	[(7, 59), (99, 119), (267, 281), (284, 305), (469, 478), (510, 535), (670, 737)]
Superposition	-
Region	11
Alignment Nr	[(0, 52), (92, 112), (115, 134), (260, 274), (277, 298), (462, 471), (663, 730)]
Uniprot Nr	[(7, 59), (99, 119), (122, 141), (267, 281), (284, 305), (469, 478), (670, 737)]
Superposition	-
Region	12
Alignment Nr	[(0, 52), (92, 112), (277, 298), (503, 528), (663, 730), (813, 828)]
Uniprot Nr	[(7, 59), (99, 119), (284, 305), (510, 535), (670, 737), (820, 835)]
Superposition	-
Region	13
Alignment Nr	[(0, 52), (60, 88), (138, 183), (277, 298), (329, 347)]
Uniprot Nr	[(7, 59), (67, 95), (145, 190), (284, 305), (336, 354)]
Superposition	-
Region	14
Alignment Nr	[(0, 52), (225, 238), (260, 274), (277, 298), (559, 646)]
Uniprot Nr	[(7, 59), (232, 245), (267, 281), (284, 305), (566, 653)]
Superposition	-
Region	15
Alignment Nr	[(0, 52), (770, 790), (792, 806), (813, 828)]
Uniprot Nr	[(7, 59), (777, 797), (799, 813), (820, 835)]
Superposition	-
Region	16
Alignment Nr	[(0, 52), (737, 764), (792, 806)]
Uniprot Nr	[(7, 59), (744, 771), (799, 813)]
Superposition	-