STRuster

STRuster results: 56717

SCOP 1.71 classification

Class:	Multi-domain proteins (alpha and beta)
Fold:	Prokaryotic type I DNA topoisomerase
Superfamily:	Prokaryotic type I DNA topoisomerase
Family:	Prokaryotic type I DNA topoisomerase
Protein:	DNA topoisomerase III
Species:	Escherichia coli
Species SCOP sunid:	56717

Set description

Number of entries:	2
SCOP Entries:	d1i7da_ d1d6ma_
Alignment File:	56717.alig
Aligned Sequences:	56717_alig.fasta

Hierarchical clustering

Dissimilary matrix:

56717_dissim_matrix.txt

Atom Distance Standard Deviation Plots

S matrix: Distance Standard Deviation

Higher resolution plot

S matrix

T matirx: Total Standard Deviation

Higher resolution plot

T matrix

R matrix: Relative Distance Standard Deviation

Higher resolution plot

R matrix

Hinges and Invariant Regions (T)

Hinges

Alignment Nr	[(19, 20), (31, 75), (108, 126), (164, 192), (245, 246), (355, 358), (372, 380), (428, 431), (450, 451), (503, 523), (560, 574), (598, 608)]
Uniprot Nr	[(20, 21), (32, 76), (109, 127), (165, 193), (246, 247), (356, 359), (373, 381), (429, 432), (451, 452), (504, 524), (561, 575), (599, 609)]

Invariant Regions

Region	1
Alignment Nr	[(193, 244), (247, 354), (359, 371), (381, 427), (432, 449), (452, 502), (524, 559), (609, 619)]
Uniprot Nr	[(194, 245), (248, 355), (360, 372), (382, 428), (433, 450), (453, 503), (525, 560), (610, 620)]
Superposition	56717_superp_1.pdb.gz
Rasmol Script	56717_superp_1.rsm
View in Jmol
Region	2
Alignment Nr	[(0, 18), (21, 30), (76, 107), (127, 163), (575, 597), (609, 619)]
Uniprot Nr	[(1, 19), (22, 31), (77, 108), (128, 164), (576, 598), (610, 620)]
Superposition	56717_superp_2.pdb.gz
Rasmol Script	56717_superp_2.rsm
View in Jmol
Region	3
Alignment Nr	[(76, 107), (193, 244), (609, 619)]
Uniprot Nr	[(77, 108), (194, 245), (610, 620)]
Superposition	56717_superp_3.pdb.gz
Rasmol Script	56717_superp_3.rsm
View in Jmol