| STRuster results: 56715 |
| SCOP 1.71 classification |
| Class: | Multi-domain proteins (alpha and beta) |
| Fold: | Prokaryotic type I DNA topoisomerase |
| Superfamily: | Prokaryotic type I DNA topoisomerase |
| Family: | Prokaryotic type I DNA topoisomerase |
| Protein: | DNA topoisomerase I, 67K N-terminal domain |
| Species: | Escherichia coli |
| Species SCOP sunid: | 56715 |
| Set description |
| Number of entries: | 14 |
| SCOP Entries: | d1cy6a_ d1mw8x_ d1cy9a_ d1cy0a_ d1cy9b_ d1cyya_ d1mw9x_ d1cy1a_ d1cy2a_ d1ecl__ d1cy8a_ d1cy7a_ d1cyyb_ d1cy4a_ |
| Alignment File: | 56715.alig |
| Aligned Sequences: | 56715_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 56715_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 0), (36, 37), (60, 61), (353, 362), (424, 425), (439, 450), (476, 478), (500, 512), (589, 594)] |
| Uniprot Nr | [(2, 2), (38, 39), (62, 63), (355, 364), (426, 427), (441, 452), (478, 480), (502, 514), (591, 596)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(1, 35), (38, 59), (62, 352), (426, 438), (479, 499), (513, 588)] |
| Uniprot Nr | [(3, 37), (40, 61), (64, 354), (428, 440), (481, 501), (515, 590)] |
| Superposition | 56715_superp_1.pdb.gz |
| Rasmol Script | 56715_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(1, 35), (38, 59), (451, 475), (479, 499), (513, 588)] |
| Uniprot Nr | [(3, 37), (40, 61), (453, 477), (481, 501), (515, 590)] |
| Superposition | 56715_superp_2.pdb.gz |
| Rasmol Script | 56715_superp_2.rsm |
| View in Jmol | |
