| STRuster results: 56693 |
| SCOP 1.71 classification |
| Class: | Multi-domain proteins (alpha and beta) |
| Fold: | DNA/RNA polymerases |
| Superfamily: | DNA/RNA polymerases |
| Family: | T7 RNA polymerase |
| Protein: | T7 RNA polymerase |
| Species: | Bacteriophage T7 |
| Species SCOP sunid: | 56693 |
| Set description |
| Number of entries: | 14 |
| SCOP Entries: | d1h38d_ d1ceza_ d1h38a_ d1mswd_ d1s0vb_ d1h38c_ d1s0vd_ d1s77d_ d1s0va_ d1h38b_ d1s76d_ d1qlna_ d1arop_ d1s0vc_ |
| Alignment File: | 56693.alig |
| Aligned Sequences: | 56693_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 56693_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 2), (18, 19), (40, 43), (263, 264), (286, 290), (342, 371), (490, 495), (559, 563), (582, 592), (606, 612), (628, 645), (709, 716), (739, 741), (755, 755), (808, 809), (836, 837), (848, 857), (868, 881)] |
| Uniprot Nr | [(2, 4), (20, 21), (42, 45), (265, 266), (288, 292), (344, 373), (492, 497), (561, 565), (584, 594), (608, 614), (630, 647), (711, 718), (741, 743), (757, 757), (810, 811), (838, 839), (850, 859), (870, 883)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(20, 39), (265, 285), (291, 341), (372, 489), (496, 558), (717, 738), (810, 835), (838, 847), (858, 867)] |
| Uniprot Nr | [(22, 41), (267, 287), (293, 343), (374, 491), (498, 560), (719, 740), (812, 837), (840, 849), (860, 869)] |
| Superposition | 56693_superp_1.pdb.gz |
| Rasmol Script | 56693_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(564, 581), (717, 738), (810, 835)] |
| Uniprot Nr | [(566, 583), (719, 740), (812, 837)] |
| Superposition | 56693_superp_2.pdb.gz |
| Rasmol Script | 56693_superp_2.rsm |
| View in Jmol | |
| Region | 3 |
| Alignment Nr | [(564, 581), (613, 627), (646, 708)] |
| Uniprot Nr | [(566, 583), (615, 629), (648, 710)] |
| Superposition | 56693_superp_3.pdb.gz |
| Rasmol Script | 56693_superp_3.rsm |
| View in Jmol | |
| Region | 4 |
| Alignment Nr | [(613, 627), (838, 847)] |
| Uniprot Nr | [(615, 629), (840, 849)] |
| Superposition | - |
