| STRuster results: 56676 |
| SCOP 1.71 classification |
| Class: | Multi-domain proteins (alpha and beta) |
| Fold: | DNA/RNA polymerases |
| Superfamily: | DNA/RNA polymerases |
| Family: | DNA polymerase I |
| Protein: | DNA polymerase I (Klenow fragment) |
| Species: | Thermus aquaticus |
| Species SCOP sunid: | 56676 |
| Set description |
| Number of entries: | 11 |
| SCOP Entries: | d1bgxt4 d1qsya2 d5ktqa2 d1qtma2 d1qssa2 d1cmwa4 d1taua4 d2ktqa2 d4ktqa2 d3ktqa2 d1ktq_2 |
| Alignment File: | 56676.alig |
| Aligned Sequences: | 56676_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 56676_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(38, 56), (71, 124), (156, 168), (212, 270), (360, 361), (407, 409)] |
| Uniprot Nr | [(461, 479), (494, 547), (579, 591), (635, 693), (783, 784), (830, 832)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 37), (125, 155), (169, 211), (271, 359), (362, 406)] |
| Uniprot Nr | [(423, 460), (548, 578), (592, 634), (694, 782), (785, 829)] |
| Superposition | 56676_superp_1.pdb.gz |
| Rasmol Script | 56676_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(57, 70)] |
| Uniprot Nr | [(480, 493)] |
| Superposition | 56676_superp_2.pdb.gz |
| Rasmol Script | 56676_superp_2.rsm |
| View in Jmol | |
