STRuster

STRuster results: 56588

SCOP 1.71 classification

Class:	Multi-domain proteins (alpha and beta)
Fold:	Serpins
Superfamily:	Serpins
Family:	Serpins
Protein:	Plasminogen activator inhibitor-1
Species:	Human (Homo sapiens)
Species SCOP sunid:	56588

Set description

Number of entries:	15
SCOP Entries:	d1a7ca_ d1oc0a_ d1dvmd_ d1dvma_ d1db2b_ d9paia_ d1db2a_ d1dvna_ d1b3ka_ d1dvmc_ d1b3kd_ d1b3kc_ d1lj5a_ d1b3kb_ d1dvmb_
Alignment File:	56588.alig
Aligned Sequences:	56588_alig.fasta

Hierarchical clustering

Dissimilary matrix:

56588_dissim_matrix.txt

Atom Distance Standard Deviation Plots

S matrix: Distance Standard Deviation

Higher resolution plot

S matrix

T matirx: Total Standard Deviation

Higher resolution plot

T matrix

R matrix: Relative Distance Standard Deviation

Higher resolution plot

R matrix

Hinges and Invariant Regions (T)

Hinges

Alignment Nr	[(0, 5), (25, 29), (48, 52), (67, 88), (99, 101), (115, 121), (144, 157), (180, 196), (212, 277), (300, 302), (313, 314), (353, 355), (376, 378)]
Uniprot Nr	[(24, 29), (49, 53), (72, 76), (91, 112), (123, 125), (139, 145), (168, 181), (204, 220), (236, 301), (324, 326), (337, 338), (377, 379), (400, 402)]

Invariant Regions

Region	1
Alignment Nr	[(6, 24), (30, 47), (53, 66), (102, 114), (197, 211), (278, 299), (356, 375)]
Uniprot Nr	[(30, 48), (54, 71), (77, 90), (126, 138), (221, 235), (302, 323), (380, 399)]
Superposition	56588_superp_1.pdb.gz
Rasmol Script	56588_superp_1.rsm
View in Jmol
Region	2
Alignment Nr	[(6, 24), (30, 47), (53, 66), (102, 114), (122, 143), (197, 211), (356, 375)]
Uniprot Nr	[(30, 48), (54, 71), (77, 90), (126, 138), (146, 167), (221, 235), (380, 399)]
Superposition	56588_superp_2.pdb.gz
Rasmol Script	56588_superp_2.rsm
View in Jmol
Region	3
Alignment Nr	[(6, 24), (30, 47), (53, 66), (122, 143), (158, 179), (197, 211), (356, 375)]
Uniprot Nr	[(30, 48), (54, 71), (77, 90), (146, 167), (182, 203), (221, 235), (380, 399)]
Superposition	56588_superp_3.pdb.gz
Rasmol Script	56588_superp_3.rsm
View in Jmol
Region	4
Alignment Nr	[(53, 66), (89, 98), (122, 143), (158, 179)]
Uniprot Nr	[(77, 90), (113, 122), (146, 167), (182, 203)]
Superposition	-