| STRuster results: 55988 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a+b) |
| Fold: | DNA clamp |
| Superfamily: | DNA clamp |
| Family: | DNA polymerase processivity factor |
| Protein: | UL42 |
| Species: | Human herpes virus type 1 |
| Species SCOP sunid: | 55988 |
| Set description |
| Number of entries: | 8 |
| SCOP Entries: | d1dmla2 d1dmla1 d1dmlc2 d1dmlc1 d1dmlg2 d1dmlg1 d1dmle1 d1dmle2 |
| Alignment File: | 55988.alig |
| Aligned Sequences: | 55988_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 55988_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(74, 76), (114, 127), (197, 199), (223, 224), (241, 244), (276, 291)] |
| Uniprot Nr | [(102, 104), (142, 155), (225, 227), (251, 252), (269, 272), (304, 319)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 73), (77, 113), (128, 196), (225, 240), (245, 275)] |
| Uniprot Nr | [(28, 101), (105, 141), (156, 224), (253, 268), (273, 303)] |
| Superposition | - |
| Region | 2 |
| Alignment Nr | [(0, 73), (77, 113), (200, 222)] |
| Uniprot Nr | [(28, 101), (105, 141), (228, 250)] |
| Superposition | - |
