STRuster results: 54931 |
SCOP 1.71 classification |
Class: | Alpha and beta proteins (a+b) |
Fold: | Ferredoxin-like |
Superfamily: | RNA-binding domain, RBD |
Family: | Canonical RBD |
Protein: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Species: | Human (Homo sapiens) |
Species SCOP sunid: | 54931 |
Set description |
Number of entries: | 20 |
SCOP Entries: | d1u1qa_ d2up1a1 d1u1la_ d2up1a2 d1u1ka_ d1u1oa_ d1ha1_1 d1up1_2 d1ha1_2 d1pgza1 d1pgza2 d1po6a1 d1u1ma_ d1l3ka1 d1l3ka2 d1u1pa_ d1u1na_ d1up1_1 d1po6a2 d1u1ra_ |
Alignment File: | 54931.alig |
Aligned Sequences: | 54931_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 54931_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(84, 93)] |
Uniprot Nr | [(90, 99)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(0, 83), (94, 183)] |
Uniprot Nr | [(6, 89), (100, 189)] |
Superposition | 54931_superp_1.pdb.gz |
Rasmol Script | 54931_superp_1.rsm |
View in Jmol | |