| STRuster results: 54043 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a+b) |
| Fold: | Cysteine proteinases |
| Superfamily: | Cysteine proteinases |
| Family: | Calpain large subunit, catalytic domain (domain II) |
| Protein: | Calpain large subunit, catalytic domain (domain II) |
| Species: | Rat (Rattus norvegicus), M-type |
| Species SCOP sunid: | 54043 |
| Set description |
| Number of entries: | 3 |
| SCOP Entries: | d1mdwa_ d1df0a3 d1mdwb_ |
| Alignment File: | 54043.alig |
| Aligned Sequences: | 54043_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 54043_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(19, 20), (87, 121), (169, 171), (194, 225), (240, 242), (258, 262), (286, 288), (319, 320), (340, 353)] |
| Uniprot Nr | [(20, 21), (88, 122), (170, 172), (195, 226), (241, 243), (259, 263), (287, 289), (320, 321), (341, 354)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 18), (21, 86), (122, 168), (172, 193), (243, 257), (289, 318)] |
| Uniprot Nr | [(1, 19), (22, 87), (123, 169), (173, 194), (244, 258), (290, 319)] |
| Superposition | 54043_superp_1.pdb.gz |
| Rasmol Script | 54043_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(0, 18), (226, 239), (243, 257), (263, 285), (289, 318), (321, 339)] |
| Uniprot Nr | [(1, 19), (227, 240), (244, 258), (264, 286), (290, 319), (322, 340)] |
| Superposition | 54043_superp_2.pdb.gz |
| Rasmol Script | 54043_superp_2.rsm |
| View in Jmol | |
