| STRuster results: 54024 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a+b) |
| Fold: | Cysteine proteinases |
| Superfamily: | Cysteine proteinases |
| Family: | Papain-like |
| Protein: | (Pro)cathepsin B |
| Species: | Rat (Rattus norvegicus) |
| Species SCOP sunid: | 54024 |
| Set description |
| Number of entries: | 4 |
| SCOP Entries: | d1mira_ d1mirb_ d1thea_ d1theb_ |
| Alignment File: | 54024.alig |
| Aligned Sequences: | 54024_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 54024_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 25), (44, 52), (159, 176), (188, 189), (305, 312)] |
| Uniprot Nr | [(27, 52), (71, 79), (186, 203), (215, 216), (332, 339)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(26, 43), (53, 158), (190, 304)] |
| Uniprot Nr | [(53, 70), (80, 185), (217, 331)] |
| Superposition | 54024_superp_1.pdb.gz |
| Rasmol Script | 54024_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(53, 158), (177, 187), (190, 304)] |
| Uniprot Nr | [(80, 185), (204, 214), (217, 331)] |
| Superposition | 54024_superp_2.pdb.gz |
| Rasmol Script | 54024_superp_2.rsm |
| View in Jmol | |
