STRuster results: 53309 |
SCOP 1.71 classification |
Class: | Alpha and beta proteins (a/b) |
Fold: | vWA-like |
Superfamily: | vWA-like |
Family: | Integrin A (or I) domain |
Protein: | Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit) |
Species: | Human (Homo sapiens) |
Species SCOP sunid: | 53309 |
Set description |
Number of entries: | 5 |
SCOP Entries: | d1n9za_ d1ido__ d1m1ua_ d1na5a_ d1jlm__ |
Alignment File: | 53309.alig |
Aligned Sequences: | 53309_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 53309_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(34, 36), (112, 113), (142, 150), (167, 194)] |
Uniprot Nr | [(180, 182), (258, 259), (288, 296), (313, 340)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(0, 33), (37, 111), (114, 141)] |
Uniprot Nr | [(146, 179), (183, 257), (260, 287)] |
Superposition | 53309_superp_1.pdb.gz |
Rasmol Script | 53309_superp_1.rsm |
View in Jmol | |
Region | 2 |
Alignment Nr | [(37, 111), (114, 141), (151, 166)] |
Uniprot Nr | [(183, 257), (260, 287), (297, 312)] |
Superposition | 53309_superp_2.pdb.gz |
Rasmol Script | 53309_superp_2.rsm |
View in Jmol | |