STRuster

STRuster results: 52703

SCOP 1.71 classification

Class:	Alpha and beta proteins (a/b)
Fold:	P-loop containing nucleoside triphosphate hydrolases
Superfamily:	P-loop containing nucleoside triphosphate hydrolases
Family:	Tandem AAA-ATPase domain
Protein:	DEXX box DNA helicase
Species:	Escherichia coli, RepD
Species SCOP sunid:	52703

Set description

Number of entries:	4
SCOP Entries:	d1uaaa1 d1uaaa2 d1uaab1 d1uaab2
Alignment File:	52703.alig
Aligned Sequences:	52703_alig.fasta

Hierarchical clustering

Dissimilary matrix:

52703_dissim_matrix.txt

Atom Distance Standard Deviation Plots

S matrix: Distance Standard Deviation

Higher resolution plot

S matrix

T matirx: Total Standard Deviation

Higher resolution plot

T matrix

R matrix: Relative Distance Standard Deviation

Higher resolution plot

R matrix

Hinges and Invariant Regions (T)

Hinges

Alignment Nr	[(0, 0), (65, 77), (96, 104), (118, 122), (142, 160), (230, 230), (263, 264), (296, 304), (336, 340), (369, 373), (440, 441), (517, 519), (533, 539), (553, 562), (584, 600), (613, 618)]
Uniprot Nr	[(2, 2), (67, 79), (98, 106), (120, 124), (144, 162), (232, 232), (265, 266), (298, 306), (338, 342), (371, 375), (442, 443), (519, 521), (535, 541), (555, 564), (586, 602), (615, 620)]

Invariant Regions

Region	1
Alignment Nr	[(1, 64), (78, 95), (105, 117), (123, 141), (161, 229), (231, 262), (265, 295), (341, 368), (563, 583), (601, 612), (619, 640)]
Uniprot Nr	[(3, 66), (80, 97), (107, 119), (125, 143), (163, 231), (233, 264), (267, 297), (343, 370), (565, 585), (603, 614), (621, 642)]
Superposition	-
Region	2
Alignment Nr	[(1, 64), (78, 95), (105, 117), (161, 229), (231, 262), (265, 295), (305, 335), (341, 368), (563, 583), (601, 612), (619, 640)]
Uniprot Nr	[(3, 66), (80, 97), (107, 119), (163, 231), (233, 264), (267, 297), (307, 337), (343, 370), (565, 585), (603, 614), (621, 642)]
Superposition	-
Region	3
Alignment Nr	[(1, 64), (78, 95), (105, 117), (123, 141), (161, 229), (231, 262), (265, 295), (374, 439), (442, 516), (520, 532)]
Uniprot Nr	[(3, 66), (80, 97), (107, 119), (125, 143), (163, 231), (233, 264), (267, 297), (376, 441), (444, 518), (522, 534)]
Superposition	-