STRuster results: 51563 |
SCOP 1.71 classification |
Class: | Alpha and beta proteins (a/b) |
Fold: | TIM beta/alpha-barrel |
Superfamily: | Metallo-dependent hydrolases |
Family: | alpha-subunit of urease, catalytic domain |
Protein: | alpha-subunit of urease, catalytic domain |
Species: | Bacillus pasteurii |
Species SCOP sunid: | 51563 |
Set description |
Number of entries: | 6 |
SCOP Entries: | d4ubpc2 d1s3tc2 d1ubpc2 d3ubpc2 d2ubpc2 d1ie7c2 |
Alignment File: | 51563.alig |
Aligned Sequences: | 51563_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 51563_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(185, 189), (203, 206)] |
Uniprot Nr | [(315, 319), (333, 336)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(0, 184), (207, 439)] |
Uniprot Nr | [(131, 314), (337, 569)] |
Superposition | 51563_superp_1.pdb.gz |
Rasmol Script | 51563_superp_1.rsm |
View in Jmol | |
Region | 2 |
Alignment Nr | [(190, 202)] |
Uniprot Nr | [(320, 332)] |
Superposition | 51563_superp_2.pdb.gz |
Rasmol Script | 51563_superp_2.rsm |
View in Jmol | |