STRuster results: 51448 |
SCOP 1.71 classification |
Class: | Alpha and beta proteins (a/b) |
Fold: | TIM beta/alpha-barrel |
Superfamily: | (Trans)glycosidases |
Family: | Amylase, catalytic domain |
Protein: | Bacterial alpha-amylase |
Species: | Bacillus licheniformis |
Species SCOP sunid: | 51448 |
Set description |
Number of entries: | 4 |
SCOP Entries: | d1bli_2 d1bpl.1 d1ob0a2 d1vjs_2 |
Alignment File: | 51448.alig |
Aligned Sequences: | 51448_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 51448_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(175, 178), (190, 194)] |
Uniprot Nr | [(207, 210), (222, 226)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(0, 174), (179, 189), (195, 390)] |
Uniprot Nr | [(32, 206), (211, 221), (227, 422)] |
Superposition | 51448_superp_1.pdb.gz |
Rasmol Script | 51448_superp_1.rsm |
View in Jmol | |