| STRuster results: 50274 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | OB-fold |
| Superfamily: | Nucleic acid-binding proteins |
| Family: | Single strand DNA-binding domain, SSB |
| Protein: | Telomere end binding protein alpha subunit |
| Species: | Oxytricha nova |
| Species SCOP sunid: | 50274 |
| Set description |
| Number of entries: | 48 |
| SCOP Entries: | d1phja2 d1ph7a1 d1ph7a2 d1ph7a3 d1phja1 d1phja3 d1ph9a3 d1ph9a1 d1ph5a2 d1jb7a1 d1jb7a2 d1jb7a3 d1ph4a2 d1ph4a1 d1ph3a1 d1ph3a2 d1ph3a3 d1k8gc1 d1k8gb2 d1k8gb1 d1ph9a2 d1k8ga2 d1k8ga1 d1ph2a3 d1kixa3 d1kixa2 d1kixa1 d1ph6a1 d1ph6a3 d1ph6a2 d1ph5a3 d1otca3 d1otca2 d1otca1 d1ph8a3 d1ph8a2 d1ph8a1 d1pa6a2 d1pa6a3 d1pa6a1 d1k8gc2 d1ph2a1 d1ph2a2 d1ph1a2 d1ph1a3 d1ph1a1 d1ph4a3 d1ph5a1 |
| Alignment File: | 50274.alig |
| Aligned Sequences: | 50274_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 50274_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(11, 14), (33, 34), (50, 60), (118, 131), (280, 283), (294, 296), (368, 372)] |
| Uniprot Nr | [(46, 49), (68, 69), (85, 95), (153, 166), (315, 318), (329, 331), (403, 407)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 10), (15, 32), (35, 49), (61, 117), (132, 279), (284, 293), (297, 367), (373, 460)] |
| Uniprot Nr | [(35, 45), (50, 67), (70, 84), (96, 152), (167, 314), (319, 328), (332, 402), (408, 495)] |
| Superposition | - |
