| STRuster results: 50126 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | SH3-like barrel |
| Superfamily: | DNA-binding domain of retroviral integrase |
| Family: | DNA-binding domain of retroviral integrase |
| Protein: | DNA-binding domain of retroviral integrase |
| Species: | Rous sarcoma virus (RSV, avian sarcoma virus) |
| Species SCOP sunid: | 50126 |
| Set description |
| Number of entries: | 4 |
| SCOP Entries: | d1c0mc1 d1c0ma1 d1c0md1 d1c0mb1 |
| Alignment File: | 50126.alig |
| Aligned Sequences: | 50126_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 50126_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 3), (25, 27), (51, 53)] |
| Uniprot Nr | [(789, 792), (814, 816), (840, 842)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(4, 24), (28, 50)] |
| Uniprot Nr | [(793, 813), (817, 839)] |
| Superposition | 50126_superp_1.pdb.gz |
| Rasmol Script | 50126_superp_1.rsm |
| View in Jmol | |
