| STRuster results: 49691 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Nucleoplasmin-like/VP (viral coat and capsid proteins) |
| Superfamily: | Group I dsDNA viruses |
| Family: | Papovaviridae-like VP |
| Protein: | Polyomavirus coat proteins |
| Species: | Simian virus 40, Sv40 |
| Species SCOP sunid: | 49691 |
| Set description |
| Number of entries: | 6 |
| SCOP Entries: | d1sva2_ d1sva1_ d1sva4_ d1sva3_ d1sva6_ d1sva5_ |
| Alignment File: | 49691.alig |
| Aligned Sequences: | 49691_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 49691_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 1), (86, 92), (284, 294), (347, 348)] |
| Uniprot Nr | [(16, 17), (102, 108), (300, 310), (363, 364)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(2, 85), (93, 283)] |
| Uniprot Nr | [(18, 101), (109, 299)] |
| Superposition | 49691_superp_1.pdb.gz |
| Rasmol Script | 49691_superp_1.rsm |
| View in Jmol | |
