| STRuster results: 49644 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Nucleoplasmin-like/VP (viral coat and capsid proteins) |
| Superfamily: | Positive stranded ssRNA viruses |
| Family: | Tymoviridae-like VP |
| Protein: | Tymovirus coat protein |
| Species: | DYMV (Desmodium yellow mottle tymovirus) |
| Species SCOP sunid: | 49644 |
| Set description |
| Number of entries: | 3 |
| SCOP Entries: | d1ddla_ d1ddlc_ d1ddlb_ |
| Alignment File: | 49644.alig |
| Aligned Sequences: | 49644_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 49644_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 23), (110, 125), (182, 187)] |
| Uniprot Nr | [(1, 24), (111, 126), (183, 188)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(24, 109), (126, 181)] |
| Uniprot Nr | [(25, 110), (127, 182)] |
| Superposition | 49644_superp_1.pdb.gz |
| Rasmol Script | 49644_superp_1.rsm |
| View in Jmol | |
