| STRuster results: 49640 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Nucleoplasmin-like/VP (viral coat and capsid proteins) |
| Superfamily: | Positive stranded ssRNA viruses |
| Family: | Tymoviridae-like VP |
| Protein: | Tymovirus coat protein |
| Species: | TYMV (Turnip yellow mosaic virus) |
| Species SCOP sunid: | 49640 |
| Set description |
| Number of entries: | 6 |
| SCOP Entries: | d1w39b_ d1auyc_ d1w39a_ d1auyb_ d1w39c_ d1auya_ |
| Alignment File: | 49640.alig |
| Aligned Sequences: | 49640_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 49640_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 14), (110, 126), (182, 188)] |
| Uniprot Nr | [(1, 15), (111, 127), (183, 189)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(15, 109), (127, 181)] |
| Uniprot Nr | [(16, 110), (128, 182)] |
| Superposition | 49640_superp_1.pdb.gz |
| Rasmol Script | 49640_superp_1.rsm |
| View in Jmol | |
