STRuster results: 49636 |
SCOP 1.71 classification |
Class: | All beta proteins |
Fold: | Nucleoplasmin-like/VP (viral coat and capsid proteins) |
Superfamily: | Positive stranded ssRNA viruses |
Family: | Bromoviridae-like VP |
Protein: | Cucumovirus coat protein |
Species: | Cowpea chlorotic mottle virus |
Species SCOP sunid: | 49636 |
Set description |
Number of entries: | 3 |
SCOP Entries: | d1cwpc_ d1cwpa_ d1cwpb_ |
Alignment File: | 49636.alig |
Aligned Sequences: | 49636_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 49636_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(14, 15), (158, 163)] |
Uniprot Nr | [(40, 41), (184, 189)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(0, 13), (16, 157)] |
Uniprot Nr | [(26, 39), (42, 183)] |
Superposition | 49636_superp_1.pdb.gz |
Rasmol Script | 49636_superp_1.rsm |
View in Jmol | |