| STRuster results: 49626 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Nucleoplasmin-like/VP (viral coat and capsid proteins) |
| Superfamily: | Positive stranded ssRNA viruses |
| Family: | Tombusviridae-like VP |
| Protein: | Sobemovirus coat protein |
| Species: | RYMV (Rice yellow mottle virus) |
| Species SCOP sunid: | 49626 |
| Set description |
| Number of entries: | 3 |
| SCOP Entries: | d1f2na_ d1f2nb_ d1f2nc_ |
| Alignment File: | 49626.alig |
| Aligned Sequences: | 49626_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 49626_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(22, 25)] |
| Uniprot Nr | [(50, 53)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 21), (26, 211)] |
| Uniprot Nr | [(28, 49), (54, 239)] |
| Superposition | 49626_superp_1.pdb.gz |
| Rasmol Script | 49626_superp_1.rsm |
| View in Jmol | |
