| STRuster results: 49476 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Prealbumin-like |
| Superfamily: | Transthyretin (synonym: prealbumin) |
| Family: | Transthyretin (synonym: prealbumin) |
| Protein: | Transthyretin (synonym: prealbumin) |
| Species: | Rat (Rattus norvegicus) |
| Species SCOP sunid: | 49476 |
| Set description |
| Number of entries: | 16 |
| SCOP Entries: | d1gked_ d1kgib_ d1gkea_ d1kgia_ d1ie4a_ d1ie4d_ d1kgid_ d1gkec_ d1kgjb_ d1ie4b_ d1kgja_ d1kgjd_ d1kgic_ d1gkeb_ d1kgjc_ d1ie4c_ |
| Alignment File: | 49476.alig |
| Aligned Sequences: | 49476_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 49476_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 5), (92, 98), (118, 122)] |
| Uniprot Nr | [(25, 30), (117, 123), (143, 147)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(6, 91), (99, 117)] |
| Uniprot Nr | [(31, 116), (124, 142)] |
| Superposition | 49476_superp_1.pdb.gz |
| Rasmol Script | 49476_superp_1.rsm |
| View in Jmol | |
