| STRuster results: 49250 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Immunoglobulin-like beta-sandwich |
| Superfamily: | E set domains |
| Family: | NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |
| Protein: | p50 subunit of NF-kappa B transcription factor |
| Species: | Mouse (Mus musculus) |
| Species SCOP sunid: | 49250 |
| Set description |
| Number of entries: | 12 |
| SCOP Entries: | d1nfkb1 d1le5b1 d1nfka1 d1le5f1 d1iknc_ d1ooaa1 d1leib1 d1vkxb1 d1le9f1 d1bfs__ d1ooab1 d1le9b1 |
| Alignment File: | 49250.alig |
| Aligned Sequences: | 49250_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 49250_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 1), (40, 45), (72, 77)] |
| Uniprot Nr | [(245, 246), (285, 290), (317, 322)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(2, 39), (46, 71), (78, 111)] |
| Uniprot Nr | [(247, 284), (291, 316), (323, 356)] |
| Superposition | 49250_superp_1.pdb.gz |
| Rasmol Script | 49250_superp_1.rsm |
| View in Jmol | |
