| STRuster results: 48442 |
| SCOP 1.71 classification |
| Class: | All alpha proteins |
| Fold: | alpha-alpha superhelix |
| Superfamily: | Protein prenylyltransferase |
| Family: | Protein prenylyltransferase |
| Protein: | Protein farnesyltransferase alpha-subunit |
| Species: | Rat (Rattus norvegicus) |
| Species SCOP sunid: | 48442 |
| Set description |
| Number of entries: | 48 |
| SCOP Entries: | d1qbqa_ d1kzpa_ d1n4qc_ d1n4qk_ d1n4sk_ d1s64i_ d1n4pc_ d1s64a_ d1n4pk_ d1fppa_ d1nl4a_ d1n4rk_ d1sa5a_ d1n4qe_ d1n4rc_ d1n9aa_ d1s64c_ d1kzoa_ d1jcra_ d1n4si_ d1d8da_ d1s64g_ d1n4pa_ d1n4sa_ d1o1ra_ d1n95a_ d1n4pi_ d1n4re_ d1ft1a_ d1n4qg_ d1n4pg_ d1n4sg_ d1n4sc_ d1ft2a_ d1s64e_ d1n4rg_ d1x81a_ d1d8ea_ d1n4qa_ d1n4qi_ d1jcsa_ d1s64k_ d1n4pe_ d1n4se_ d1o5ma_ d1n94a_ d1n4ri_ d1n4ra_ |
| Alignment File: | 48442.alig |
| Aligned Sequences: | 48442_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 48442_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 14), (37, 38), (299, 303), (314, 323)] |
| Uniprot Nr | [(54, 68), (91, 92), (353, 357), (368, 377)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(15, 36), (39, 298), (304, 313)] |
| Uniprot Nr | [(69, 90), (93, 352), (358, 367)] |
| Superposition | 48442_superp_1.pdb.gz |
| Rasmol Script | 48442_superp_1.rsm |
| View in Jmol | |
