| STRuster results: 47948 |
| SCOP 1.71 classification |
| Class: | All alpha proteins |
| Fold: | Retrovirus capsid protein, N-terminal core domain |
| Superfamily: | Retrovirus capsid protein, N-terminal core domain |
| Family: | Retrovirus capsid protein, N-terminal core domain |
| Protein: | EIAV capsid protein p26 |
| Species: | Equine infectious anemia virus |
| Species SCOP sunid: | 47948 |
| Set description |
| Number of entries: | 3 |
| SCOP Entries: | d1eia_2 d2eiab2 d2eiaa2 |
| Alignment File: | 47948.alig |
| Aligned Sequences: | 47948_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 47948_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 2), (13, 14), (45, 46), (71, 82), (129, 131)] |
| Uniprot Nr | [(140, 142), (153, 154), (185, 186), (211, 222), (269, 271)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(3, 12), (15, 44), (47, 70), (83, 128)] |
| Uniprot Nr | [(143, 152), (155, 184), (187, 210), (223, 268)] |
| Superposition | 47948_superp_1.pdb.gz |
| Rasmol Script | 47948_superp_1.rsm |
| View in Jmol | |
