| STRuster results: 46700 |
| SCOP 1.71 classification |
| Class: | All alpha proteins |
| Fold: | DNA/RNA-binding 3-helical bundle |
| Superfamily: | Homeodomain-like |
| Family: | Homeodomain |
| Protein: | Oct-1 POU Homeodomain |
| Species: | Human (Homo sapiens) |
| Species SCOP sunid: | 46700 |
| Set description |
| Number of entries: | 6 |
| SCOP Entries: | d1hf0a1 d1e3oc1 d1gt0c1 d1cqta1 d1hf0b1 d1cqtb1 |
| Alignment File: | 46700.alig |
| Aligned Sequences: | 46700_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 46700_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(61, 64)] |
| Uniprot Nr | [(436, 439)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 60)] |
| Uniprot Nr | [(375, 435)] |
| Superposition | 46700_superp_1.pdb.gz |
| Rasmol Script | 46700_superp_1.rsm |
| View in Jmol | |
