| STRuster results: 117087 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Nucleoplasmin-like/VP (viral coat and capsid proteins) |
| Superfamily: | Nucleoplasmin-like core domain |
| Family: | Nucleoplasmin-like core domain |
| Protein: | Nucleophosmin (NO38) |
| Species: | African clawed frog (Xenopus laevis) |
| Species SCOP sunid: | 117087 |
| Set description |
| Number of entries: | 20 |
| SCOP Entries: | d1xe0j_ d1xe0b_ d1xb9e_ d1xe0g_ d1xb9j_ d1xb9b_ d1xe0d_ d1xb9g_ d1xe0i_ d1xe0a_ d1xb9d_ d1xe0f_ d1xb9i_ d1xb9a_ d1xe0c_ d1xb9f_ d1xe0h_ d1xb9c_ d1xe0e_ d1xb9h_ |
| Alignment File: | 117087.alig |
| Aligned Sequences: | 117087_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 117087_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(26, 29), (111, 112)] |
| Uniprot Nr | [(36, 39), (121, 122)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 25), (30, 110)] |
| Uniprot Nr | [(15, 35), (40, 120)] |
| Superposition | 117087_superp_1.pdb.gz |
| Rasmol Script | 117087_superp_1.rsm |
| View in Jmol | |
