| STRuster results: 116819 |
| SCOP 1.71 classification |
| Class: | All alpha proteins |
| Fold: | DNA/RNA-binding 3-helical bundle |
| Superfamily: | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| Family: | YlxM/p13-like |
| Protein: | Hypothetical protein SAV1236 |
| Species: | Staphylococcus aureus, strain Mu50 / ATCC 700699 |
| Species SCOP sunid: | 116819 |
| Set description |
| Number of entries: | 2 |
| SCOP Entries: | d1xsva_ d1xsvb_ |
| Alignment File: | 116819.alig |
| Aligned Sequences: | 116819_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 116819_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 10), (28, 32), (48, 56)] |
| Uniprot Nr | [(5, 14), (32, 36), (52, 60)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(11, 27), (33, 47)] |
| Uniprot Nr | [(15, 31), (37, 51)] |
| Superposition | 116819_superp_1.pdb.gz |
| Rasmol Script | 116819_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(11, 27), (57, 107)] |
| Uniprot Nr | [(15, 31), (61, 110)] |
| Superposition | 116819_superp_2.pdb.gz |
| Rasmol Script | 116819_superp_2.rsm |
| View in Jmol | |
