| STRuster results: 111382 |
| SCOP 1.71 classification |
| Class: | Membrane and cell surface proteins and peptides |
| Fold: | VP4 membrane interaction domain |
| Superfamily: | VP4 membrane interaction domain |
| Family: | VP4 membrane interaction domain |
| Protein: | VP4 membrane interaction domain |
| Species: | Rhesus rotavirus |
| Species SCOP sunid: | 111382 |
| Set description |
| Number of entries: | 6 |
| SCOP Entries: | d1slqc_ d1slqf_ d1slqa_ d1slqd_ d1slqb_ d1slqe_ |
| Alignment File: | 111382.alig |
| Aligned Sequences: | 111382_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 111382_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 6), (52, 59), (81, 82), (94, 95), (137, 141), (154, 155), (181, 210), (225, 226), (263, 271)] |
| Uniprot Nr | [(252, 258), (304, 311), (333, 334), (346, 347), (389, 393), (406, 407), (433, 462), (477, 478), (515, 523)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(7, 51), (60, 80), (83, 93), (96, 136), (142, 153), (156, 180), (211, 224), (227, 262)] |
| Uniprot Nr | [(259, 303), (312, 332), (335, 345), (348, 388), (394, 405), (408, 432), (463, 476), (479, 514)] |
| Superposition | 111382_superp_1.pdb.gz |
| Rasmol Script | 111382_superp_1.rsm |
| View in Jmol | |
