STRuster results: 110746 |
SCOP 1.71 classification |
Class: | Alpha and beta proteins (a/b) |
Fold: | Periplasmic binding protein-like I |
Superfamily: | Periplasmic binding protein-like I |
Family: | L-arabinose binding protein-like |
Protein: | AI-2 receptor LsrB |
Species: | Salmonella typhi |
Species SCOP sunid: | 110746 |
Set description |
Number of entries: | 2 |
SCOP Entries: | d1tm2a_ d1tjya_ |
Alignment File: | 110746.alig |
Aligned Sequences: | 110746_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 110746_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(111, 125), (221, 234), (261, 275), (287, 290), (308, 315)] |
Uniprot Nr | [(136, 150), (246, 259), (286, 300), (312, 315), (333, 340)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(0, 110), (235, 260), (276, 286), (291, 307)] |
Uniprot Nr | [(25, 135), (260, 285), (301, 311), (316, 332)] |
Superposition | 110746_superp_1.pdb.gz |
Rasmol Script | 110746_superp_1.rsm |
View in Jmol | |
Region | 2 |
Alignment Nr | [(126, 220), (276, 286), (291, 307)] |
Uniprot Nr | [(151, 245), (301, 311), (316, 332)] |
Superposition | 110746_superp_2.pdb.gz |
Rasmol Script | 110746_superp_2.rsm |
View in Jmol | |