STRuster results: 110386 |
SCOP 1.71 classification |
Class: | Alpha and beta proteins (a/b) |
Fold: | TIM beta/alpha-barrel |
Superfamily: | UROD/MetE-like |
Family: | Cobalamin-independent methionine synthase |
Protein: | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE |
Species: | Thale cress (Arabidopsis thaliana) |
Species SCOP sunid: | 110386 |
Set description |
Number of entries: | 8 |
SCOP Entries: | d1u1ha2 d1u1ha1 d1u22a2 d1u22a1 d1u1ja2 d1u1ja1 d1u1ua1 d1u1ua2 |
Alignment File: | 110386.alig |
Aligned Sequences: | 110386_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 110386_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(404, 412), (447, 452), (468, 472), (486, 499), (548, 549), (664, 666), (691, 699), (720, 721), (738, 741), (754, 776)] |
Uniprot Nr | [(398, 406), (441, 446), (462, 466), (480, 493), (540, 541), (651, 653), (677, 685), (706, 707), (723, 726), (739, 760)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(0, 403), (413, 446), (473, 485), (500, 547), (550, 663), (667, 690), (700, 719), (722, 737), (742, 753)] |
Uniprot Nr | [(2, 397), (407, 440), (467, 479), (494, 539), (542, 650), (654, 676), (686, 705), (708, 722), (727, 738)] |
Superposition | - |
Region | 2 |
Alignment Nr | [(413, 446), (453, 467), (473, 485), (550, 663), (667, 690)] |
Uniprot Nr | [(407, 440), (447, 461), (467, 479), (542, 650), (654, 676)] |
Superposition | - |