| STRuster results: 109698 |
| SCOP 1.71 classification |
| Class: | All alpha proteins |
| Fold: | DNA/RNA-binding 3-helical bundle |
| Superfamily: | "Winged helix" DNA-binding domain |
| Family: | Vacuolar sorting protein domain |
| Protein: | Vacuolar protein sorting-associated protein VPS25 |
| Species: | Baker's yeast (Saccharomyces cerevisiae) |
| Species SCOP sunid: | 109698 |
| Set description |
| Number of entries: | 8 |
| SCOP Entries: | d1w7pb2 d1u5td2 d1u5td1 d1w7pb1 d1w7pc2 d1w7pc1 d1u5tc2 d1u5tc1 |
| Alignment File: | 109698.alig |
| Aligned Sequences: | 109698_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 109698_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 8), (22, 23), (38, 50), (75, 84), (97, 198)] |
| Uniprot Nr | [(1, 9), (23, 24), (39, 51), (76, 85), (98, 199)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(9, 21), (24, 37), (51, 74), (85, 96)] |
| Uniprot Nr | [(10, 22), (25, 38), (52, 75), (86, 97)] |
| Superposition | - |
