STRuster results: 103494 |
SCOP 1.71 classification |
Class: | Membrane and cell surface proteins and peptides |
Fold: | Preprotein translocase SecY subunit |
Superfamily: | Preprotein translocase SecY subunit |
Family: | Preprotein translocase SecY subunit |
Protein: | Preprotein translocase SecY subunit |
Species: | Archaeon Methanococcus jannaschii |
Species SCOP sunid: | 103494 |
Set description |
Number of entries: | 2 |
SCOP Entries: | d1rh5a_ d1rhza_ |
Alignment File: | 103494.alig |
Aligned Sequences: | 103494_alig.fasta |
Hierarchical clustering |
Dissimilary matrix: | 103494_dissim_matrix.txt |
Atom Distance Standard Deviation Plots |
S matrix: Distance Standard Deviation |
Higher resolution plot |
S matrix |
T matirx: Total Standard Deviation |
Higher resolution plot |
T matrix |
R matrix: Relative Distance Standard Deviation |
Higher resolution plot |
R matrix |
Hinges and Invariant Regions (T) |
Hinges |
Alignment Nr | [(0, 26), (44, 58), (87, 109), (128, 146), (162, 167), (185, 204), (223, 374), (386, 399), (420, 431)] |
Uniprot Nr | [(2, 28), (46, 60), (89, 111), (130, 148), (164, 169), (187, 206), (225, 376), (388, 401), (422, 433)] |
Invariant Regions |
Region | 1 |
Alignment Nr | [(27, 43), (59, 86), (110, 127), (147, 161), (168, 184), (205, 222), (375, 385), (400, 419)] |
Uniprot Nr | [(29, 45), (61, 88), (112, 129), (149, 163), (170, 186), (207, 224), (377, 387), (402, 421)] |
Superposition | 103494_superp_1.pdb.gz |
Rasmol Script | 103494_superp_1.rsm |
View in Jmol | |