| STRuster results: 103420 |
| SCOP 1.71 classification |
| Class: | Multi-domain proteins (alpha and beta) |
| Fold: | Major capsid protein VP5 |
| Superfamily: | Major capsid protein VP5 |
| Family: | Major capsid protein VP5 |
| Protein: | Major capsid protein VP5 |
| Species: | Herpes simplex virus |
| Species SCOP sunid: | 103420 |
| Set description |
| Number of entries: | 2 |
| SCOP Entries: | d1no7b_ d1no7a_ |
| Alignment File: | 103420.alig |
| Aligned Sequences: | 103420_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 103420_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(73, 82), (227, 232), (433, 441), (460, 461)] |
| Uniprot Nr | [(557, 566), (711, 716), (917, 925), (944, 945)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 72), (83, 226), (233, 432), (442, 459), (462, 561)] |
| Uniprot Nr | [(484, 556), (567, 710), (717, 916), (926, 943), (946, 1045)] |
| Superposition | 103420_superp_1.pdb.gz |
| Rasmol Script | 103420_superp_1.rsm |
| View in Jmol | |
